Results for 'Stefanie F. Smith'

946 found
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  1. Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project.Chris F. Taylor, Dawn Field, Susanna-Assunta Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, Catherine A. Ball, Pierre-Alain Binz, Molly Bogue, Tim Booth, Alvis Brazma, Ryan R. Brinkman, Adam Michael Clark, Eric W. Deutsch, Oliver Fiehn, Jennifer Fostel, Peter Ghazal, Frank Gibson, Tanya Gray, Graeme Grimes, John M. Hancock, Nigel W. Hardy, Henning Hermjakob, Randall K. Julian, Matthew Kane, Carsten Kettner, Christopher Kinsinger, Eugene Kolker, Martin Kuiper, Nicolas Le Novere, Jim Leebens-Mack, Suzanna E. Lewis, Phillip Lord, Ann-Marie Mallon, Nishanth Marthandan, Hiroshi Masuya, Ruth McNally, Alexander Mehrle, Norman Morrison, Sandra Orchard, John Quackenbush, James M. Reecy, Donald G. Robertson, Philippe Rocca-Serra, Henry Rodriguez, Heiko Rosenfelder, Javier Santoyo-Lopez, Richard H. Scheuermann, Daniel Schober, Barry Smith & Jason Snape - 2008 - Nature Biotechnology 26 (8):889-896.
    Throughout the biological and biomedical sciences there is a growing need for, prescriptive ‘minimum information’ (MI) checklists specifying the key information to include when reporting experimental results are beginning to find favor with experimentalists, analysts, publishers and funders alike. Such checklists aim to ensure that methods, data, analyses and results are described to a level sufficient to support the unambiguous interpretation, sophisticated search, reanalysis and experimental corroboration and reuse of data sets, facilitating the extraction of maximum value from data sets (...)
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  2. Survey-based naming conventions for use in OBO Foundry ontology development.Schober Daniel, Barry Smith, Lewis Suzanna, E. Kusnierczyk, Waclaw Lomax, Jane Mungall, Chris Taylor, F. Chris, Rocca-Serra Philippe & Sansone Susanna-Assunta - 2009 - BMC Bioinformatics 10 (1):125.
    A wide variety of ontologies relevant to the biological and medical domains are available through the OBO Foundry portal, and their number is growing rapidly. Integration of these ontologies, while requiring considerable effort, is extremely desirable. However, heterogeneities in format and style pose serious obstacles to such integration. In particular, inconsistencies in naming conventions can impair the readability and navigability of ontology class hierarchies, and hinder their alignment and integration. While other sources of diversity are tremendously complex and challenging, agreeing (...)
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  3. The Ontology for Biomedical Investigations.Anita Bandrowski, Ryan Brinkman, Mathias Brochhausen, Matthew H. Brush, Bill Bug, Marcus C. Chibucos, Kevin Clancy, Mélanie Courtot, Dirk Derom, Michel Dumontier, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Frank Gibson, Alejandra Gonzalez-Beltran, Melissa A. Haendel, Yongqun He, Mervi Heiskanen, Tina Hernandez-Boussard, Mark Jensen, Yu Lin, Allyson L. Lister, Phillip Lord, James Malone, Elisabetta Manduchi, Monnie McGee, Norman Morrison, James A. Overton, Helen Parkinson, Bjoern Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Richard H. Scheuermann, Daniel Schober, Barry Smith, Larisa N. Soldatova, Christian J. Stoeckert, Chris F. Taylor, Carlo Torniai, Jessica A. Turner, Randi Vita, Patricia L. Whetzel & Jie Zheng - 2016 - PLoS ONE 11 (4):e0154556.
    The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with precisely defined meanings to describe all aspects of how investigations in the biological and medical domains are conducted. OBI re-uses ontologies that provide a representation of biomedical knowledge from the Open Biological and Biomedical Ontologies (OBO) project and adds the ability to describe how this knowledge was derived. We here describe the state of OBI and several applications that are using it, such as adding semantic expressivity to (...)
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  4. Facing Death; The Desperate at its Most Beautiful.Stefanie Rocknak - 2005 - Phenomenological Inquiry, A Review of Philosophical Ideas and Trends 29:71-101.
    Is there a distinction between “art” and “craft,” where the former is motivated by something like “genuine” or “authentic” creativity and the latter by, at best, skill and skill alone, and at a worst, a fumbling attempt to fit in with popular modes of expression? In this paper, I suggest that there does seem to be such a distinction. In particular, I attempt to show that genuine creativity, and so, genuine art—in varying respects—is motivated by a certain recognition of what (...)
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  5. BFO-based ontology enhancement to promote interoperability in BIM.Justine Flore Tchouanguem, Mohamed Hedi Karray, Bernard Kamsu Foguem, Camille Magniont, F. Henry Abanda & Barry Smith - 2021 - Applied ontology 16 (4):1–27.
    Building Information Modelling (BIM) is a process for managing construction project information in such a way as to provide a basis for enhanced decision-making and for collaboration in a construction supply chain. One impediment to the uptake of BIM is the limited interoperability of different BIM systems. To overcome this problem, a set of Industry Foundation Classes (IFC) has been proposed as a standard for the construction industry. Building on IFC, the ifcOWL ontology was developed in order to facilitate representation (...)
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  6. Bioportal: Ontologies and integrated data resources at the click of the mouse.L. Whetzel Patricia, H. Shah Nigam, F. Noy Natalya, Dai Benjamin, Dorf Michael, Griffith Nicholas, Jonquet Clement, Youn Cherie, Callendar Chris, Coulet Adrien, Barry Smith, Chris Chute & Mark Musen - 2011 - In Whetzel Patricia L., Shah Nigam H., Noy Natalya F., Benjamin Dai, Michael Dorf, Nicholas Griffith, Clement Jonquet, Cherie Youn, Chris Callendar, Adrien Coulet, Smith Barry, Chute Chris & Musen Mark (eds.), Proceedings of the 2nd International Conference on Biomedical Ontology, Buffalo, NY. pp. 292-293.
    BioPortal is a Web portal that provides access to a library of biomedical ontologies and terminologies developed in OWL, RDF(S), OBO format, Protégé frames, and Rich Release Format. BioPortal functionality, driven by a service-oriented architecture, includes the ability to browse, search and visualize ontologies (Figure 1). The Web interface also facilitates community-based participation in the evaluation and evolution of ontology content.
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  7. Andrew F. Smith, A Critique of the Moral Defense of Vegetarianism. Reviewed by.Patrick Clipsham - 2016 - Philosophy in Review 36 (4):179-181.
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  8. The National Center for Biomedical Ontology.Mark A. Musen, Natalya F. Noy, Nigam H. Shah, Patricia L. Whetzel, Christopher G. Chute, Margaret-Anne Story & Barry Smith - 2012 - Journal of the American Medical Informatics Association 19 (2):190-195.
    The National Center for Biomedical Ontology is now in its seventh year. The goals of this National Center for Biomedical Computing are to: create and maintain a repository of biomedical ontologies and terminologies; build tools and web services to enable the use of ontologies and terminologies in clinical and translational research; educate their trainees and the scientific community broadly about biomedical ontology and ontology-based technology and best practices; and collaborate with a variety of groups who develop and use ontologies and (...)
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  9. Discussion of “Biomedical informatics: We are what we publish”.Geissbuhler Antoine, W. E. Hammond, A. Hasman, R. Hussein, R. Koppel, C. A. Kulikowski, V. Maojo, F. Martin-Sanchez, P. W. Moorman, Moura La, F. G. De Quiros, M. J. Schuemle, Barry Smith & J. Talmon - 2013 - Methods of Information in Medicine 52 (6):547-562.
    This article is part of a For-Discussion-Section of Methods of Information in Medicine about the paper "Biomedical Informatics: We Are What We Publish", written by Peter L. Elkin, Steven H. Brown, and Graham Wright. It is introduced by an editorial. This article contains the combined commentaries invited to independently comment on the Elkin et al. paper. In subsequent issues the discussion can continue through letters to the editor.
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  10. Review of F. Nietzsche, Writings from the Late Notebooks. Edited by R. Bittner and translated by K. Sturge. [REVIEW]Joel Smith - 2003 - Philosophical Writings 22:69-71.
    As so often with his published texts, the experience of reading Nietzsche’s notebooks is at once mesmerising and infuriating. One is in the presence of a thinker who, on the one hand, meditates deeply on fundamental issues in philosophy and psychology but who, on the other, refuses to be pinned down. The fact that Nietzsche’s style is so elusive can account for the enormously disparate interpretations of his work and it is no surprise that his notebooks have been read in (...)
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  11. Against Fantology.Barry Smith - 2005 - In Johann C. Marek Maria E. Reicher (ed.), Experience and Analysis. HPT&ÖBV. pp. 153-170.
    The analytical philosophy of the last hundred years has been heavily influenced by a doctrine to the effect that the key to the correct understanding of reality is captured syntactically in the ‘Fa’ (or, in more sophisticated versions, in the ‘Rab’) of standard first order predicate logic. Here ‘F’ stands for what is general in reality and ‘a’ for what is individual. Hence “f(a)ntology”. Because predicate logic has exactly two syntactically different kinds of referring expressions—‘F’, ‘G’, ‘R’, etc., and ‘a’, (...)
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  12. Ontology as the core discipline of biomedical informatics: Legacies of the past and recommendations for the future direction of research.Barry Smith & Werner Ceusters - 2007 - In Gordana Dodig Crnkovic & Susan Stuart (eds.), Computation, Information, Cognition: The Nexus and the Liminal.f. Cambridge Scholars Press. pp. 104-122.
    The automatic integration of rapidly expanding information resources in the life sciences is one of the most challenging goals facing biomedical research today. Controlled vocabularies, terminologies, and coding systems play an important role in realizing this goal, by making it possible to draw together information from heterogeneous sources – for example pertaining to genes and proteins, drugs and diseases – secure in the knowledge that the same terms will also represent the same entities on all occasions of use. In the (...)
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  13. Crosbie Smith, The Science of Energy: The Cultural History of Energy Physics in Victorian Britain. [REVIEW]Sean F. Johnston - 2000 - Science and Public Policy 27:45-46.
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  14. Biomedical ontology alignment: An approach based on representation learning.Prodromos Kolyvakis, Alexandros Kalousis, Barry Smith & Dimitris Kiritsis - 2018 - Journal of Biomedical Semantics 9 (21).
    While representation learning techniques have shown great promise in application to a number of different NLP tasks, they have had little impact on the problem of ontology matching. Unlike past work that has focused on feature engineering, we present a novel representation learning approach that is tailored to the ontology matching task. Our approach is based on embedding ontological terms in a high-dimensional Euclidean space. This embedding is derived on the basis of a novel phrase retrofitting strategy through which semantic (...)
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  15. (1 other version)GOL: A general ontological language.Wolfgang Degen, Barbara Heller, Heinrich Herre & Barry Smith - 2001 - In Barry Smith & Christopher Welty (eds.), Formal Ontology in Information Systems (FOIS). ACM Press. pp. 34-46.
    Every domain-specific ontology must use as a framework some upper-level ontology which describes the most general, domain-independent categories of reality. In the present paper we sketch a new type of upper-level ontology, which is intended to be the basis of a knowledge modelling language GOL (for: 'General Ontological Language'). It turns out that the upper- level ontology underlying standard modelling languages such as KIF, F-Logic and CycL is restricted to the ontology of sets. Set theory has considerable mathematical power and (...)
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  16. Three objections to Smith on vagueness.Brian Weatherson - manuscript
    F-relevant respects are never precisely defined, but the intuitive idea is clear enough. Smart- relevant respects are mental abilities, Philosopher-relevant respects presumably include where one is employed, what kinds of things one writes, etc, and, most importantly for this paper, the only Tall-relevant respect is height.
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  17. The Limits of Free Will: Replies to Bennett, Smith and Wallace.Paul Russell - 2021 - Ethical Theory and Moral Practice 24 (1):357-373.
    This is a contribution to a Book symposium on The Limits of Free Will: Selected Essays by Paul Russell. Russell provides replies to three critics of The Limits of Free Will. The first reply is to Robert Wallace and focuses on the question of whether there is a conflict between the core compatibilist and pessimist components of the "critical compatibilist" position that Russell has advanced. The second reply is to Angela Smith's discussion of the "narrow" interpretation of moral responsibility (...)
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  18. Wer sind wir, wenn wir arbeiten? Soziale Identität im Markt bei Smith und Hegel.Lisa Maria Herzog - 2011 - Deutsche Zeitschrift für Philosophie 59 (6):835-852.
    This article examines the ways in which Adam Smith and G. W. F Hegel conceptualize the identity of workers in a market economy. Although both see human beings as shaped in and through social rela- tionships, the relation between the worker and his work is seen in different ways. For Smith, workers “have” human capital, while for Hegel workers “are” brewers, butchers or bakers;; their profession is part of their identity. This conceptual difference, which is reflected in different (...)
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  19. Against Fantology Again.Ingvar Johansson - 2016 - In Leo Zaibert (ed.), The Theory and Practice of Ontology. Palgrave Macmillian. pp. 25-43.
    This essay expands on Barry Smith’s paper “Against Fantology” of 2005, which defends the view that analytic philosophy has throughout its history been marked by a tendency to conceive the syntax of first-order predicate logic as a key to ontology. I present fantology (or "F(a)ntology") in the light of a more general and in itself ontologically neutral operation that I call a default ontologization of a language. I then discuss Quine’s views, since he is the most outspoken fantologist in (...)
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  20. Ensaios sobre a filosofia de Strawson capa-strawson-edufsccom a tradução de Liberdade e ressentimento & Moralidade social e ideal individual.Jaimir Conte & Itamar Luis Gelain - 2005 - Florianópolis, SC, Brasil: Editora da UFSC.
    Sumário. Apresentação. PARTE I. 1. O legado filosófico de P. F. Strawson, Itamar Luís Gelain e Jaimir Conte; 2 . Strawson e o caso dos metafísicos descritivos, Itamar Luís Gelain; 3. Metafísica e linguagem comum: sobre uma conturbada herança wittgensteiniana de Strawson, Jônadas Techio; 4. Strawson e Descartes, Albertinho Luiz Gallina; 5. Strawson: sobre Kant e Berkeley, Robert Calabria; 6. O empirismo pós-kantiano de Strawson, Wenceslao J. González; 7. Reabilitando Strawson, Marco Antonio Franciotti; 8. Strawson e o ceticismo em Individuals, (...)
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  21. Two Theories of Economic Liberalism.Mark R. Reiff - 2017 - The Adam Smith Review 10:189-214.
    Within the Anglo-American world, economic liberalism is generally viewed as having only one progenitor—Adam Smith—and one offspring—neoliberalism. But it actually has two. The work of G. W. F. Hegel was also very influential on the development of economic liberalism, at least in the German-speaking world, and the most powerful contemporary instantiation of economic liberalism within that world is not neoliberlaism, but ordoliberalism, although this is generally unknown and certainly unacknowledged outside of Continental Europe. Accordingly, what I am going to (...)
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  22. Psychological Operationisms at Harvard: Skinner, Boring, and Stevens.Sander Verhaegh - 2021 - Journal of the History of the Behavioral Sciences 57 (2):194-212.
    Contemporary discussions about operational definition often hark back to Stanley Smith Stevens’ classic papers on psychological operationism (1935ab). Still, he was far from the only psychologist to call for conceptual hygiene. Some of Stevens’ direct colleagues at Harvard---most notably B. F. Skinner and E. G. Boring---were also actively applying Bridgman’s conceptual strictures to the study of mind and behavior. In this paper, I shed new light on the history of operationism by reconstructing the Harvard debates about operational definition in (...)
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  23. Freedom and Moral Sentiment: Hume's Way of Naturalizing Responsibility.Paul Russell - 1995 - New York, NY, USA: Oxford University Press.
    In this book, Russell examines Hume's notion of free will and moral responsibility. It is widely held that Hume presents us with a classic statement of a compatibilist position--that freedom and responsibility can be reconciled with causation and, indeed, actually require it. Russell argues that this is a distortion of Hume's view, because it overlooks the crucial role of moral sentiment in Hume's picture of human nature. Hume was concerned to describe the regular mechanisms which generate moral sentiments such as (...)
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  24. Le libéralisme, l’utilitarisme et l’économie politique classique dans l’interprétation d’Élie Halévy.Philippe Mongin - 1990 - la Revue du M.A.U.S.S 10:135-169.
    Élie HALÉVY (1870-1937), philosophe et historien des idées, fut professeur à l'École libre des sciences politiques, l'ancêtre de l'actuel Sciences Po. Comme son autre grand ouvrage, l'Histoire du peuple anglais au XIXe siècle, paru en six tomes de 1913 à 1932, les trois tomes de La formation du radicalisme philosophique, parus en 1901 pour les deux premiers et en 1904 pour le troisième, reflètent pour partie ses enseignements de l'Ecole libre consacrés à l'histoire britannique. Le premier tome, La jeunesse de (...)
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  25. Proper function and recent selection.Peter H. Schwartz - 1999 - Philosophy of Science 66 (3):210-222.
    "Modern History" versions of the etiological theory claim that in order for a trait X to have the proper function F, individuals with X must have been recently favored by natural selection for doing F (Godfrey-Smith 1994; Griffiths 1992, 1993). For many traits with prototypical proper functions, however, such recent selection may not have occurred: traits may have been maintained due to lack of variation or due to selection for other effects. I examine this flaw in Modern History accounts (...)
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  26. Free Will and Moral Sense: Strawsonian Approaches.Paul Russell - 2016 - In Kevin Timpe, Meghan Griffith & Neil Levy (eds.), Routledge Companion to Free Will. New York: Routledge. pp. 96-108.
    Over the past few centuries the free will debate has largely turned on the question of whether or not the truth of the thesis of determinism is compatible with the relevant form of freedom that is required for moral responsibility. This way of approaching the free will problem was fundamentally challenged by P.F. Strawson in his hugely influential paper “Freedom and Resentment,” which was published in 1962. In this paper Strawson pursues a line of argument that can be found in (...)
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  27. The Place of Political Forgiveness in Jus post Bellum.Leonard Kahn - forthcoming - In Court Lewis (ed.), Underrepresented Perspectives on Forgiveness. Vernon Press.
    Jus post Bellum is, like Jus ad Bellum and Jus in Bello, a part of just war theory. Jus post Bellum is distinguished from the other parts of just war theory by being primarily concerned with the principles necessary for securing a just and lasting peace after the end of a war. Traditionally, jus post bellum has focused primarily on three goals: [1] compensating those who have been the victims of unjust aggression, while respecting the rights of the aggressors, [2] (...)
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  28. Puberdade e Estacionalidade Reprodutiva dos Animais.Emanuel Isaque Cordeiro da Silva - manuscript
    OBJETIVO -/- O estudante de Zootecnia e de Veterinária, quando se depara com a produção animal, um dos pilares importantes é a reprodução, uma vez que é a perpetuação da espécie, seja para gerar filhas de uma vaca campeã em produção leiteira e de um touro com rusticidade e com aptidão produtiva de corte, ou mesmo para reposição de um plantel, o mesmo deve estar consciente de que esse ramo é de extrema responsabilidade, já que estará intimamente lidando com a (...)
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  29. Fisiologia do Ciclo Estral dos Animais Domésticos.Emanuel Isaque Cordeiro da Silva -
    FISIOLOGIA DO CICLO ESTRAL DOS ANIMAIS -/- Departamento de Zootecnia – UFRPE Embrapa Semiárido e IPA -/- • _____OBJETIVO -/- O cio ou estro é a fase reprodutiva dos animais, onde as fêmeas apresentam receptividade sexual seguida de ovulação. Para tanto, é necessário entender a fisiologia do estro para a realização do manejo reprodutivo dos animais. Em geral, as fêmeas manifestam comportamentos fora do comum quando estão ciclando, tais comportamentos devem ser observados para que não percam o pico de ovulação (...)
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  30. A Consolidação da Sociedade Capitalista e a Ciência da Sociedade.Emanuel Isaque Cordeiro da Silva - manuscript
    PREMISSA No século XIX, ocorreram transformações impulsionadas pela emergência de novas fontes energéticas (água e petróleo), por novos ramos industriais e pela alteração profunda nos processos produtivos, com a introdução de novas máquinas e equipamentos. Depois de 300 anos de exploração por parte das nações europeias, iniciou -se, principalmente nas colônias latino-americanas, um processo intenso de lutas pela independência. É no século XIX, já com a consolidação do sistema capitalista na Europa, que se encontra a herança intelectual mais próxima da (...)
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  31. (1 other version)Global Consequentialism.Philip Pettit & Michael Smith - 2000 - In Brad Hooker, Elinor Mason, Dale E. Miller, D. W. Haslett, Shelly Kagan, Sanford S. Levy, David Lyons, Phillip Montague, Tim Mulgan, Philip Pettit, Madison Powers, Jonathan Riley, William H. Shaw, Michael Smith & Alan Thomas (eds.), Morality, Rules, and Consequences: A Critical Reader. Rowman & Littlefield Publishers.
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  32. Function, role and disposition in Basic Formal Ontology.Robert Arp & Barry Smith - 2008 - Proceedings of Bio-Ontologies Workshop, Intelligent Systems for Molecular Biology (ISMB), Toronto.
    Numerous research groups are now utilizing Basic Formal Ontology as an upper-level framework to assist in the organization and integration of biomedical information. This paper provides elucidation of the three existing BFO subcategories of realizable entity, namely function, role, and disposition. It proposes one further sub-category of tendency, and considers the merits of recognizing two sub-categories of function for domain ontologies, namely, artifactual and biological function. The motivation is to help advance the coherent ontological treatment of functions, roles, and dispositions, (...)
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  33. A Taxonomy of Granular Partitions.Thomas E. Bittner & Barry Smith - 2001 - In Thomas Bittner (ed.), Spatial Information Theory. Foundations of Geographic Information Science. Lecture Notes in Computer Science 2205. pp. 28-43.
    In this paper we propose a formal theory of partitions (ways of dividing up or sorting or mapping reality) and we show how the theory can be applied in the geospatial domain. We characterize partitions at two levels: as systems of cells (theory A), and in terms of their projective relation to reality (theory B). We lay down conditions of well-formedness for partitions and we define what it means for partitions to project truly onto reality. We continue by classifying well-formed (...)
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  34. Response to My Critics (The Sydney Sessions).Stefanie Rocknak - 2022 - Hume Studies 45 (1):77-93.
    Response to Don Baxter, Don Garrett and Jennifer Marusic regarding my book Imagined Causes: Hume's Conception of Objects; initially delivered at the 2016 Hume Conference in Sydney, Australia as part of the Author Meets Critics session.
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  35. Alvin Weinberg and the promotion of the technological fix.Sean F. Johnston - 2018 - Technology and Culture 59 (3):620-651.
    The term “technological fix”, coined by technologist/administrator Alvin Weinberg in 1965, vaunted engineering innovation as a generic tool for circumventing problems commonly conceived as social, political or cultural. A longtime Director of Oak Ridge National Laboratory, government consultant and essayist, Weinberg also popularized the term “Big Science” to describe national goals and the competitive funding environment after the Second World War. Big Science reoriented towards Technological Fixes, he argued, could provide a new “Apollo project” to address social problems of the (...)
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  36. Layers: A New Approach to Locating Objects in Space.Maureen Donnelly & Barry Smith - 2003 - In W. Kuhn M. F. Worboys & S. Timpf (eds.), Spatial Information Theory: Foundations of Geographic Informa­tion Science. Springer. pp. 50-65.
    Standard theories in mereotopology focus on relations of parthood and connection among spatial or spatio-temporal regions. Objects or processes which might be located in such regions are not normally directly treated in such theories. At best, they are simulated via appeal to distributions of attributes across the regions occupied or by functions from times to regions. The present paper offers a richer framework, in which it is possible to represent directly the relations between entities of various types at different levels, (...)
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  37. A Unified Framework for Biomedical Terminologies and Ontologies.Werner Ceusters & Barry Smith - 2010 - Studies in Health Technology and Informatics 160:1050-1054.
    The goal of the OBO (Open Biomedical Ontologies) Foundry initiative is to create and maintain an evolving collection of non-overlapping interoperable ontologies that will offer unambiguous representations of the types of entities in biological and biomedical reality. These ontologies are designed to serve non-redundant annotation of data and scientific text. To achieve these ends, the Foundry imposes strict requirements upon the ontologies eligible for inclusion. While these requirements are not met by most existing biomedical terminologies, the latter may nonetheless support (...)
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  38. Biomedical informatics and granularity.Anand Kumar & Barry Smith - 2004 - Comparative and Functional Genomics 5 (6-7):501-508.
    An explicit formal-ontological representation of entities existing at multiple levels of granularity is an urgent requirement for biomedical information processing. We discuss some fundamental principles which can form a basis for such a representation. We also comment on some of the implicit treatments of granularity in currently available ontologies and terminologies (GO, FMA, SNOMED CT).
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  39. A Spatio-Temporal Ontology for Geographic Information Integration.Thomas Bittner & Barry Smith - 2009 - International Journal for Geographical Information Science 23 (6):765-798.
    This paper presents an axiomatic formalization of a theory of top-level relations between three categories of entities: individuals, universals, and collections. We deal with a variety of relations between entities in these categories, including the sub-universal relation among universals and the parthood relation among individuals, as well as cross-categorial relations such as instantiation and membership. We show that an adequate understanding of the formal properties of such relations – in particular their behavior with respect to time – is critical for (...)
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  40. Foundations of an ontology of philosophy.Pierre Grenon & Barry Smith - 2011 - Synthese 182 (2):185-204.
    We describe an ontology of philosophy that is designed to aid navigation through philosophical literature, including literature in the form of encyclopedia articles and textbooks and in both printed and digital forms. The ontology is designed also to serve integration and structuring of data pertaining to the philosophical literature, and in the long term also to support reasoning about the provenance and contents of such literature, by providing a representation of the philosophical domain that is oriented around what philosophical literature (...)
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  41. Granular Partitions and Vagueness.Thomas Bittner & Barry Smith - 2001 - In Barry Smith & Christopher Welty (eds.), Formal Ontology in Information Systems (FOIS). ACM Press. pp. 309-320.
    There are some who defend a view of vagueness according to which there are intrinsically vague objects or attributes in reality. Here, in contrast, we defend a view of vagueness as a semantic property of names and predicates. All entities are crisp, on this view, but there are, for each vague name, multiple portions of reality that are equally good candidates for being its referent, and, for each vague predicate, multiple classes of objects that are equally good candidates for being (...)
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  42. Spontaneity as a Concept of General Significance: The Austrian School on Money and Economic Order.Scott Scheall - 2024 - In Joseph J. Tinguely (ed.), Palgrave Handbook of Philosophy and Money--Volume 1: Ancient and Medieval Thought. Palgrave.
    I examine the history of the concept of spontaneity in philosophy and the social sciences, particularly as it relates to monetary phenomena. I then offer an argument for the general significance of spontaneity. The essay concludes that scholars across the humanities and social sciences, whatever their (disciplinary, political, ideological, etc.) persuasion, would be well-served to further develop the theory of spontaneity and its social effects.
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  43. Investigating Subsumption in SNOMED CT: An Exploration into Large Description Logic-Based Biomedical Terminologies.Olivier Bodenreider, Barry Smith, Anand Kumar & Anita Burgun - 2007 - Artificial Intelligence in Medicine 39 (3):183-195.
    Formalisms based on one or other flavor of Description Logic (DL) are sometimes put forward as helping to ensure that terminologies and controlled vocabularies comply with sound ontological principles. The objective of this paper is to study the degree to which one DL-based biomedical terminology (SNOMED CT) does indeed comply with such principles. We defined seven ontological principles (for example: each class must have at least one parent, each class must differ from its parent) and examined the properties of SNOMED (...)
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  44. (1 other version)Referent Tracking for Command and Control Messaging Systems.Shahid Manzoor, Werner Ceusters & Barry Smith - 2009 - CEUR, Volume 555.
    The Joint Battle Management Language (JBML) is an XML-based language designed to allow Command and Control (C2) systems to interface easily with Modeling and Simulation (M&S) systems. While some of the XML-tags defined in this language correspond to types of entities that exist in reality, others are mere syntactic artifacts used to structure the messages themselves. Because these two kinds of tags are not formally distinguishable, JBML messages in effect confuse data with what the data represent. In this paper we (...)
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  45.  81
    Why Hume's Notion of Demonstration Must Reduce to Probability.Stefanie Rocknak - 2024 - In Scott Stapleford & Verena Wagner (eds.), Hume and contemporary epistemology. New York, NY: Routledge.
    This paper shows that Hume was ultimately forced to conclude in The Treatise that all demonstrative and intuited claims can in fact, be imagined as otherwise. As a result, he was forced to conclude that all knowledge claims must, ultimately, reduce to probable claims, or in Hume’s own, and indisputably clear words: “all knowledge degenerates into probability." As a further result, it is suggested (briefly) that this anticipates Quine’s well-known attack on the analytic / synthetic distinction (Quine 1953).
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  46. The technological fix as social cure-all: origins and implications.Sean F. Johnston - 2018 - IEEE Technology and Society 37 (1):47-54.
    On the historical origins of technological fixes and their wider social and political implications.
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  47. Imagined Causes: Hume’s Conception of Objects.Stefanie Rocknak - 2012 - Springer.
    This book provides the first comprehensive account of Hume’s conception of objects in Book I of the Treatise. What, according to Hume, are objects? Ideas? Impressions? Mind-independent objects? All three? None of the above? Through a close textual analysis, I show that Hume thought that objects are imagined ideas. However, I argue that he struggled with two accounts of how and when we imagine such ideas. On the one hand, Hume believed that we always and universally imagine that objects are (...)
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  48. Deleuze and Ethics.Nathan J. Jun & Daniel Warren Smith (eds.) - 2011 - Edinburgh: Edinburgh University Press.
    Eleven top Deleuze scholars reclaim Deleuzian philosophy as moral philosophy Ethics plays a crucial, if subtle, role in Gilles Deleuze's philosophical project. Michel Foucault claimed that Anti-Oedipus was `a book of ethics, the first book of ethics to be written in France in quite a long time'. But what is the nature of the immanent ethics that is developed in Deleuze's thought? How does it differ from previous conceptions of ethics? And what paths does it open for future thought, given (...)
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  49. The Curious Case of the Complicated Border: The Story of Baarle.Barry Smith - 2016 - Dutch International Society Magazine 47 (4):11-17.
    History has left a territory composed of two municipalitics, whose shape is unique, belonging partly to the Netherlands and partly to Belgium. Earlier both parts belonged to the former Duchy of Brabant, a tenitory that is now split up into the Dutch province of Noord-Brabant (including Baarle-Nassau) and thc Belgian provinces of Antwerp (which includes Baarle-Hertog), Vlaams Brabant, Brussels, and Brabant-Wallon. People are quite comfortable with this situation, even though it raises many complicated and difficult problems that even the most (...)
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  50. Adam Smith's political philosophy: the invisible hand and spontaneous order.Craig Smith - 2006 - New York: Routledge.
    When Adam Smith published his celebrated writings on economics and moral philosophy he famously referred to the operation of an invisible hand. Adam Smith's Political Philosophy makes visible the invisible hand by examining its significance in Smith's political philosophy and relating it to similar concepts used by other philosophers, revealing a distinctive approach to social theory that stresses the significance of the unintended consequences of human action. This book introduces greater conceptual clarity to the discussion of the (...)
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